Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.81□□□□□ -0.04
Hist1h1aP43275 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.81□□□□□ -0.04
Hist1h1aP43275 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h1aP43275 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h1aP43275 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.79□□□□□ -0.04
Hist1h1aP43275 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Gm9988-201ENSMUST00000069786 435 ntBASIC14.79□□□□□ -0.04
Hist1h1aP43275 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hist1h1aP43275 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.78□□□□□ -0.04
Hist1h1aP43275 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.78□□□□□ -0.04
Hist1h1aP43275 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h1aP43275 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.77□□□□□ -0.04
Hist1h1aP43275 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h1aP43275 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms