Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.31■□□□□ 0.68
HttP42859 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.31■□□□□ 0.68
HttP42859 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.31■□□□□ 0.68
HttP42859 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HttP42859 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.3■□□□□ 0.68
HttP42859 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HttP42859 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HttP42859 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.3■□□□□ 0.68
HttP42859 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HttP42859 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HttP42859 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HttP42859 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.29■□□□□ 0.68
HttP42859 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.29■□□□□ 0.68
HttP42859 Gm7213-201ENSMUST00000215977 950 ntBASIC19.29■□□□□ 0.68
HttP42859 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HttP42859 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.28■□□□□ 0.68
HttP42859 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HttP42859 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.28■□□□□ 0.68
HttP42859 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.28■□□□□ 0.68
HttP42859 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.28■□□□□ 0.68
HttP42859 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HttP42859 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HttP42859 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HttP42859 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HttP42859 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HttP42859 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HttP42859 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HttP42859 Gm7638-201ENSMUST00000121348 967 ntBASIC19.27■□□□□ 0.68
HttP42859 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.27■□□□□ 0.68
HttP42859 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.27■□□□□ 0.68
HttP42859 Gm2651-201ENSMUST00000203560 838 ntBASIC19.27■□□□□ 0.68
HttP42859 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.27■□□□□ 0.68
HttP42859 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HttP42859 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.27■□□□□ 0.68
HttP42859 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HttP42859 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.27■□□□□ 0.67
HttP42859 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HttP42859 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.27■□□□□ 0.67
HttP42859 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HttP42859 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Olfr129-201ENSMUST00000122318 993 ntBASIC19.26■□□□□ 0.67
HttP42859 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HttP42859 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HttP42859 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HttP42859 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.25■□□□□ 0.67
HttP42859 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HttP42859 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.25■□□□□ 0.67
HttP42859 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HttP42859 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HttP42859 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.25■□□□□ 0.67
HttP42859 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HttP42859 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HttP42859 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.24■□□□□ 0.67
HttP42859 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HttP42859 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HttP42859 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.24■□□□□ 0.67
HttP42859 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HttP42859 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
HttP42859 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HttP42859 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HttP42859 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms