Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cxcl12P40224 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cxcl12P40224 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cxcl12P40224 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.52■□□□□ 0.56
Cxcl12P40224 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcl12P40224 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcl12P40224 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcl12P40224 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcl12P40224 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcl12P40224 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cxcl12P40224 Gm25925-201ENSMUST00000158314 306 ntBASIC18.52■□□□□ 0.56
Cxcl12P40224 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.52■□□□□ 0.56
Cxcl12P40224 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.52■□□□□ 0.56
Cxcl12P40224 Gm43514-201ENSMUST00000198852 424 ntBASIC18.52■□□□□ 0.56
Cxcl12P40224 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cxcl12P40224 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cxcl12P40224 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cxcl12P40224 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cxcl12P40224 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cxcl12P40224 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.51■□□□□ 0.55
Cxcl12P40224 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Gm11355-201ENSMUST00000121120 306 ntBASIC18.51■□□□□ 0.55
Cxcl12P40224 Mir3081-201ENSMUST00000175305 84 ntBASIC18.51■□□□□ 0.55
Cxcl12P40224 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.51■□□□□ 0.55
Cxcl12P40224 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Gm6443-201ENSMUST00000203599 874 ntBASIC18.51■□□□□ 0.55
Cxcl12P40224 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.51■□□□□ 0.55
Cxcl12P40224 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cxcl12P40224 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cxcl12P40224 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.51■□□□□ 0.55
Cxcl12P40224 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cxcl12P40224 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.5■□□□□ 0.55
Cxcl12P40224 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cxcl12P40224 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Cxcl12P40224 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.5■□□□□ 0.55
Cxcl12P40224 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.5■□□□□ 0.55
Cxcl12P40224 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cxcl12P40224 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cxcl12P40224 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cxcl12P40224 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Cxcl12P40224 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.49■□□□□ 0.55
Cxcl12P40224 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cxcl12P40224 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.49■□□□□ 0.55
Cxcl12P40224 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cxcl12P40224 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Gm24589-201ENSMUST00000116692 94 ntBASIC18.48■□□□□ 0.55
Cxcl12P40224 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.48■□□□□ 0.55
Cxcl12P40224 Gm7213-201ENSMUST00000215977 950 ntBASIC18.48■□□□□ 0.55
Cxcl12P40224 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.48■□□□□ 0.55
Cxcl12P40224 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.48■□□□□ 0.55
Cxcl12P40224 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cxcl12P40224 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cxcl12P40224 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cxcl12P40224 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms