Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.6■□□□□ 0.25
Foxa1P35582 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxa1P35582 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.6■□□□□ 0.25
Foxa1P35582 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Gm11249-201ENSMUST00000117071 859 ntBASIC16.59■□□□□ 0.25
Foxa1P35582 Mtag2-201ENSMUST00000058665 714 ntBASIC16.59■□□□□ 0.25
Foxa1P35582 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Foxa1P35582 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Foxa1P35582 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Foxa1P35582 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Foxa1P35582 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Foxa1P35582 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Foxa1P35582 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.58■□□□□ 0.25
Foxa1P35582 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Foxa1P35582 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.58■□□□□ 0.25
Foxa1P35582 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.58■□□□□ 0.25
Foxa1P35582 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Foxa1P35582 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Foxa1P35582 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.58■□□□□ 0.24
Foxa1P35582 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.58■□□□□ 0.24
Foxa1P35582 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.58■□□□□ 0.24
Foxa1P35582 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Foxa1P35582 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.57■□□□□ 0.24
Foxa1P35582 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.57■□□□□ 0.24
Foxa1P35582 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Foxa1P35582 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.57■□□□□ 0.24
Foxa1P35582 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Gm37856-201ENSMUST00000191634 999 ntBASIC16.57■□□□□ 0.24
Foxa1P35582 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.57■□□□□ 0.24
Foxa1P35582 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Foxa1P35582 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Foxa1P35582 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Foxa1P35582 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Grk6-206ENSMUST00000224995 2971 ntBASIC16.56■□□□□ 0.24
Foxa1P35582 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.56■□□□□ 0.24
Foxa1P35582 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Foxa1P35582 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.56■□□□□ 0.24
Foxa1P35582 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Foxa1P35582 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Foxa1P35582 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Foxa1P35582 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Foxa1P35582 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.55■□□□□ 0.24
Foxa1P35582 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.55■□□□□ 0.24
Foxa1P35582 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms