Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.24□□□□□ -0.13
Rom1P32958 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rom1P32958 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.24□□□□□ -0.13
Rom1P32958 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.24□□□□□ -0.13
Rom1P32958 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rom1P32958 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rom1P32958 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rom1P32958 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Gm15546-201ENSMUST00000122095 826 ntBASIC14.22□□□□□ -0.13
Rom1P32958 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.22□□□□□ -0.13
Rom1P32958 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.22□□□□□ -0.13
Rom1P32958 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Gm5812-201ENSMUST00000061073 957 ntBASIC14.22□□□□□ -0.13
Rom1P32958 Gm9959-201ENSMUST00000068277 390 ntBASIC14.22□□□□□ -0.13
Rom1P32958 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.22□□□□□ -0.13
Rom1P32958 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rom1P32958 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.21□□□□□ -0.13
Rom1P32958 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rom1P32958 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rom1P32958 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rom1P32958 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Rom1P32958 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rom1P32958 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rom1P32958 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rom1P32958 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.21□□□□□ -0.14
Rom1P32958 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.21□□□□□ -0.14
Rom1P32958 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rom1P32958 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rom1P32958 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rom1P32958 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rom1P32958 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.2□□□□□ -0.14
Rom1P32958 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rom1P32958 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
Rom1P32958 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rom1P32958 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rom1P32958 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms