Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nedd8P29595 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nedd8P29595 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nedd8P29595 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nedd8P29595 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Nedd8P29595 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nedd8P29595 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.64■□□□□ 0.25
Nedd8P29595 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.64■□□□□ 0.25
Nedd8P29595 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nedd8P29595 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nedd8P29595 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nedd8P29595 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nedd8P29595 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nedd8P29595 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.63■□□□□ 0.25
Nedd8P29595 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nedd8P29595 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nedd8P29595 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nedd8P29595 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nedd8P29595 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nedd8P29595 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nedd8P29595 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nedd8P29595 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.62■□□□□ 0.25
Nedd8P29595 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.62■□□□□ 0.25
Nedd8P29595 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nedd8P29595 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Nedd8P29595 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.62■□□□□ 0.25
Nedd8P29595 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.62■□□□□ 0.25
Nedd8P29595 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.62■□□□□ 0.25
Nedd8P29595 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Nedd8P29595 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nedd8P29595 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.61■□□□□ 0.25
Nedd8P29595 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nedd8P29595 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.6■□□□□ 0.25
Nedd8P29595 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.6■□□□□ 0.25
Nedd8P29595 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.6■□□□□ 0.25
Nedd8P29595 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.6■□□□□ 0.25
Nedd8P29595 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd8P29595 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms