Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.25■□□□□ 0.67
Mmp3P28862 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.25■□□□□ 0.67
Mmp3P28862 Gm11539-201ENSMUST00000119837 557 ntBASIC19.25■□□□□ 0.67
Mmp3P28862 Gm13436-201ENSMUST00000120418 567 ntBASIC19.25■□□□□ 0.67
Mmp3P28862 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.25■□□□□ 0.67
Mmp3P28862 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp3P28862 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp3P28862 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Mmp3P28862 Gm13559-201ENSMUST00000120476 863 ntBASIC19.24■□□□□ 0.67
Mmp3P28862 Gm10517-202ENSMUST00000192970 758 ntBASIC19.24■□□□□ 0.67
Mmp3P28862 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.24■□□□□ 0.67
Mmp3P28862 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp3P28862 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.24■□□□□ 0.67
Mmp3P28862 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp3P28862 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp3P28862 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp3P28862 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.24■□□□□ 0.67
Mmp3P28862 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.24■□□□□ 0.67
Mmp3P28862 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.23■□□□□ 0.67
Mmp3P28862 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.23■□□□□ 0.67
Mmp3P28862 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mmp3P28862 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.23■□□□□ 0.67
Mmp3P28862 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp3P28862 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mmp3P28862 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.22■□□□□ 0.67
Mmp3P28862 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Gm10231-201ENSMUST00000181584 441 ntBASIC19.22■□□□□ 0.67
Mmp3P28862 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Gm10175-202ENSMUST00000208752 441 ntBASIC19.22■□□□□ 0.67
Mmp3P28862 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Mmp3P28862 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Mmp3P28862 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp3P28862 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.21■□□□□ 0.67
Mmp3P28862 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.21■□□□□ 0.67
Mmp3P28862 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.21■□□□□ 0.67
Mmp3P28862 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp3P28862 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Mmp3P28862 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Mmp3P28862 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp3P28862 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.21■□□□□ 0.67
Mmp3P28862 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Mmp3P28862 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mmp3P28862 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Mmp3P28862 Gm12085-201ENSMUST00000119263 940 ntBASIC19.2■□□□□ 0.66
Mmp3P28862 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Mmp3P28862 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Mmp3P28862 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp3P28862 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.2■□□□□ 0.66
Mmp3P28862 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms