Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccl6P27784 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccl6P27784 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccl6P27784 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccl6P27784 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ccl6P27784 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.98□□□□□ -0.17
Ccl6P27784 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccl6P27784 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.98□□□□□ -0.17
Ccl6P27784 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl6P27784 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccl6P27784 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccl6P27784 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccl6P27784 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.97□□□□□ -0.17
Ccl6P27784 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Ccl6P27784 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccl6P27784 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.97□□□□□ -0.17
Ccl6P27784 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl6P27784 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.96□□□□□ -0.17
Ccl6P27784 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccl6P27784 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.96□□□□□ -0.17
Ccl6P27784 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 Gm37179-201ENSMUST00000194862 823 ntBASIC13.96□□□□□ -0.17
Ccl6P27784 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccl6P27784 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl6P27784 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccl6P27784 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl6P27784 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.96□□□□□ -0.18
Ccl6P27784 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl6P27784 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl6P27784 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Ccl6P27784 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccl6P27784 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.95□□□□□ -0.18
Ccl6P27784 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Ccl6P27784 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccl6P27784 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl6P27784 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl6P27784 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ccl6P27784 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Gm6211-202ENSMUST00000167849 925 ntBASIC13.94□□□□□ -0.18
Ccl6P27784 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccl6P27784 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl6P27784 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl6P27784 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms