Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pde6aP27664 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pde6aP27664 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pde6aP27664 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Pde6aP27664 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.82■□□□□ 0.92
Pde6aP27664 Gm18666-201ENSMUST00000190039 958 ntBASIC20.82■□□□□ 0.92
Pde6aP27664 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.82■□□□□ 0.92
Pde6aP27664 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6aP27664 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pde6aP27664 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pde6aP27664 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.81■□□□□ 0.92
Pde6aP27664 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pde6aP27664 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.81■□□□□ 0.92
Pde6aP27664 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.81■□□□□ 0.92
Pde6aP27664 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.81■□□□□ 0.92
Pde6aP27664 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Pde6aP27664 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pde6aP27664 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.81■□□□□ 0.92
Pde6aP27664 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6aP27664 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.8■□□□□ 0.92
Pde6aP27664 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pde6aP27664 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 Gm13168-201ENSMUST00000121771 632 ntBASIC20.8■□□□□ 0.92
Pde6aP27664 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.8■□□□□ 0.92
Pde6aP27664 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pde6aP27664 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pde6aP27664 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Pde6aP27664 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6aP27664 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.79■□□□□ 0.92
Pde6aP27664 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6aP27664 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.79■□□□□ 0.92
Pde6aP27664 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6aP27664 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6aP27664 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.79■□□□□ 0.92
Pde6aP27664 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6aP27664 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6aP27664 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6aP27664 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6aP27664 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6aP27664 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6aP27664 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6aP27664 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pde6aP27664 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.78■□□□□ 0.92
Pde6aP27664 Gm10698-201ENSMUST00000182663 604 ntBASIC20.78■□□□□ 0.92
Pde6aP27664 Mir6349-201ENSMUST00000184059 97 ntBASIC20.78■□□□□ 0.92
Pde6aP27664 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Pde6aP27664 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6aP27664 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pde6aP27664 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pde6aP27664 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.77■□□□□ 0.92
Pde6aP27664 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.77■□□□□ 0.92
Pde6aP27664 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6aP27664 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.77■□□□□ 0.92
Pde6aP27664 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.77■□□□□ 0.91
Pde6aP27664 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pde6aP27664 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Pde6aP27664 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pde6aP27664 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.76■□□□□ 0.91
Pde6aP27664 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.76■□□□□ 0.91
Pde6aP27664 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.76■□□□□ 0.91
Pde6aP27664 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6aP27664 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.76■□□□□ 0.91
Pde6aP27664 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.75■□□□□ 0.91
Pde6aP27664 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6aP27664 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms