Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Rpl3P27659 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rpl3P27659 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rpl3P27659 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.04■□□□□ 0.32
Rpl3P27659 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.04■□□□□ 0.32
Rpl3P27659 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Rpl3P27659 Gm18284-201ENSMUST00000172604 624 ntBASIC17.04■□□□□ 0.32
Rpl3P27659 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl3P27659 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rpl3P27659 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Rpl3P27659 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.03■□□□□ 0.32
Rpl3P27659 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.03■□□□□ 0.32
Rpl3P27659 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Rpl3P27659 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpl3P27659 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rpl3P27659 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.02■□□□□ 0.32
Rpl3P27659 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rpl3P27659 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl3P27659 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rpl3P27659 Gm6365-201ENSMUST00000054711 744 ntBASIC17.02■□□□□ 0.32
Rpl3P27659 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpl3P27659 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.02■□□□□ 0.31
Rpl3P27659 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpl3P27659 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rpl3P27659 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpl3P27659 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpl3P27659 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpl3P27659 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.02■□□□□ 0.31
Rpl3P27659 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpl3P27659 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rpl3P27659 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpl3P27659 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpl3P27659 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.01■□□□□ 0.31
Rpl3P27659 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpl3P27659 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpl3P27659 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rpl3P27659 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpl3P27659 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpl3P27659 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl3P27659 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Gm10849-201ENSMUST00000100397 618 ntBASIC17■□□□□ 0.31
Rpl3P27659 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl3P27659 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpl3P27659 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Rpl3P27659 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.99■□□□□ 0.31
Rpl3P27659 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rpl3P27659 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.99■□□□□ 0.31
Rpl3P27659 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl3P27659 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms