Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.43■□□□□ 0.54
Nfkb1P25799 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.43■□□□□ 0.54
Nfkb1P25799 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nfkb1P25799 Gm37292-201ENSMUST00000192062 758 ntBASIC18.43■□□□□ 0.54
Nfkb1P25799 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nfkb1P25799 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Nfkb1P25799 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nfkb1P25799 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.42■□□□□ 0.54
Nfkb1P25799 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Mir6349-201ENSMUST00000184059 97 ntBASIC18.42■□□□□ 0.54
Nfkb1P25799 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nfkb1P25799 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nfkb1P25799 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nfkb1P25799 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.41■□□□□ 0.54
Nfkb1P25799 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.41■□□□□ 0.54
Nfkb1P25799 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Nfkb1P25799 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.41■□□□□ 0.54
Nfkb1P25799 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.41■□□□□ 0.54
Nfkb1P25799 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.41■□□□□ 0.54
Nfkb1P25799 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Nfkb1P25799 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nfkb1P25799 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.4■□□□□ 0.54
Nfkb1P25799 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nfkb1P25799 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nfkb1P25799 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.4■□□□□ 0.54
Nfkb1P25799 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.4■□□□□ 0.54
Nfkb1P25799 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Nfkb1P25799 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.4■□□□□ 0.54
Nfkb1P25799 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nfkb1P25799 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Nfkb1P25799 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nfkb1P25799 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nfkb1P25799 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.54
Nfkb1P25799 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nfkb1P25799 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nfkb1P25799 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nfkb1P25799 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nfkb1P25799 Gm12382-201ENSMUST00000122005 922 ntBASIC18.39■□□□□ 0.53
Nfkb1P25799 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Nfkb1P25799 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Nfkb1P25799 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nfkb1P25799 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nfkb1P25799 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nfkb1P25799 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nfkb1P25799 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nfkb1P25799 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Nfkb1P25799 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nfkb1P25799 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.38■□□□□ 0.53
Nfkb1P25799 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Nfkb1P25799 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nfkb1P25799 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms