Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.98□□□□□ -0.01
Col8a2P25318 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col8a2P25318 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Mir1199-201ENSMUST00000117015 119 ntBASIC14.97□□□□□ -0.01
Col8a2P25318 Gm15378-201ENSMUST00000121894 207 ntBASIC14.97□□□□□ -0.01
Col8a2P25318 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.97□□□□□ -0.01
Col8a2P25318 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Col8a2P25318 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col8a2P25318 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.96□□□□□ -0.01
Col8a2P25318 Gm15375-201ENSMUST00000119510 849 ntBASIC14.96□□□□□ -0.01
Col8a2P25318 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.96□□□□□ -0.01
Col8a2P25318 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.96□□□□□ -0.01
Col8a2P25318 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.96□□□□□ -0.01
Col8a2P25318 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.96□□□□□ -0.01
Col8a2P25318 Gm37292-201ENSMUST00000192062 758 ntBASIC14.96□□□□□ -0.01
Col8a2P25318 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col8a2P25318 Gm18025-201ENSMUST00000221733 862 ntBASIC14.96□□□□□ -0.01
Col8a2P25318 Tgds-204ENSMUST00000228543 1594 ntBASIC14.96□□□□□ -0.01
Col8a2P25318 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col8a2P25318 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Col8a2P25318 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col8a2P25318 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.96□□□□□ -0.01
Col8a2P25318 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col8a2P25318 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col8a2P25318 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Col8a2P25318 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.95□□□□□ -0.02
Col8a2P25318 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.95□□□□□ -0.02
Col8a2P25318 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col8a2P25318 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col8a2P25318 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col8a2P25318 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col8a2P25318 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Col8a2P25318 Gm715-201ENSMUST00000117865 831 ntBASIC14.94□□□□□ -0.02
Col8a2P25318 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col8a2P25318 Gm10138-203ENSMUST00000206952 366 ntBASIC14.94□□□□□ -0.02
Col8a2P25318 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.94□□□□□ -0.02
Col8a2P25318 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.94□□□□□ -0.02
Col8a2P25318 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col8a2P25318 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.93□□□□□ -0.02
Col8a2P25318 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col8a2P25318 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.93□□□□□ -0.02
Col8a2P25318 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col8a2P25318 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col8a2P25318 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col8a2P25318 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Mir2861-201ENSMUST00000175539 82 ntBASIC14.93□□□□□ -0.02
Col8a2P25318 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.93□□□□□ -0.02
Col8a2P25318 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.93□□□□□ -0.02
Col8a2P25318 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col8a2P25318 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms