Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.34■□□□□ 0.21
Cbx3P23198 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.34■□□□□ 0.21
Cbx3P23198 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.34■□□□□ 0.21
Cbx3P23198 Gm5812-201ENSMUST00000061073 957 ntBASIC16.34■□□□□ 0.21
Cbx3P23198 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cbx3P23198 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Cbx3P23198 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cbx3P23198 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.33■□□□□ 0.21
Cbx3P23198 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cbx3P23198 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cbx3P23198 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cbx3P23198 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cbx3P23198 Etf1-202ENSMUST00000180351 108 ntBASIC16.33■□□□□ 0.2
Cbx3P23198 Mir6236-201ENSMUST00000184437 123 ntBASIC16.33■□□□□ 0.2
Cbx3P23198 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cbx3P23198 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cbx3P23198 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.32■□□□□ 0.2
Cbx3P23198 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.32■□□□□ 0.2
Cbx3P23198 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.32■□□□□ 0.2
Cbx3P23198 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Gm9870-201ENSMUST00000063874 645 ntBASIC16.32■□□□□ 0.2
Cbx3P23198 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cbx3P23198 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.32■□□□□ 0.2
Cbx3P23198 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.32■□□□□ 0.2
Cbx3P23198 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Cbx3P23198 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cbx3P23198 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.31■□□□□ 0.2
Cbx3P23198 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cbx3P23198 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cbx3P23198 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cbx3P23198 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Cbx3P23198 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cbx3P23198 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cbx3P23198 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cbx3P23198 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cbx3P23198 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Cbx3P23198 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cbx3P23198 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cbx3P23198 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms