Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.38□□□□□ -0.43
Smim1P0C8K7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.38□□□□□ -0.43
Smim1P0C8K7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim1P0C8K7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.37□□□□□ -0.43
Smim1P0C8K7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim1P0C8K7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim1P0C8K7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim1P0C8K7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms