Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm27389-201ENSMUST00000183622 195 ntBASIC20.59■□□□□ 0.89
Polr2aP08775 Mzt1-203ENSMUST00000227948 952 ntBASIC20.59■□□□□ 0.89
Polr2aP08775 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Polr2aP08775 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2aP08775 Gm10566-201ENSMUST00000086739 996 ntBASIC20.59■□□□□ 0.89
Polr2aP08775 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Polr2aP08775 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2aP08775 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.59■□□□□ 0.89
Polr2aP08775 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Polr2aP08775 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2aP08775 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2aP08775 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2aP08775 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2aP08775 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2aP08775 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2aP08775 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2aP08775 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2aP08775 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2aP08775 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Polr2aP08775 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Polr2aP08775 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Polr2aP08775 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Polr2aP08775 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr2aP08775 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Polr2aP08775 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr2aP08775 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Polr2aP08775 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Polr2aP08775 Gm13401-201ENSMUST00000117074 291 ntBASIC20.57■□□□□ 0.88
Polr2aP08775 Gm37025-201ENSMUST00000195159 829 ntBASIC20.57■□□□□ 0.88
Polr2aP08775 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr2aP08775 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr2aP08775 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr2aP08775 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Polr2aP08775 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr2aP08775 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Polr2aP08775 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Polr2aP08775 Gm34391-201ENSMUST00000203706 907 ntBASIC20.56■□□□□ 0.88
Polr2aP08775 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr2aP08775 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr2aP08775 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.55■□□□□ 0.88
Polr2aP08775 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Gm27357-201ENSMUST00000183754 135 ntBASIC20.55■□□□□ 0.88
Polr2aP08775 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Polr2aP08775 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.55■□□□□ 0.88
Polr2aP08775 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Gm11950-201ENSMUST00000121615 838 ntBASIC20.55■□□□□ 0.88
Polr2aP08775 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Polr2aP08775 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2aP08775 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2aP08775 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2aP08775 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2aP08775 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2aP08775 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.54■□□□□ 0.88
Polr2aP08775 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2aP08775 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2aP08775 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Polr2aP08775 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2aP08775 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2aP08775 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2aP08775 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr2aP08775 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2aP08775 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2aP08775 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr2aP08775 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2aP08775 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2aP08775 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr2aP08775 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Polr2aP08775 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr2aP08775 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.52■□□□□ 0.88
Polr2aP08775 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2aP08775 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2aP08775 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2aP08775 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2aP08775 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2aP08775 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2aP08775 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2aP08775 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.52■□□□□ 0.88
Polr2aP08775 Gm11355-201ENSMUST00000121120 306 ntBASIC20.52■□□□□ 0.87
Polr2aP08775 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.52■□□□□ 0.87
Polr2aP08775 Gm9731-201ENSMUST00000209480 747 ntBASIC20.52■□□□□ 0.87
Polr2aP08775 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Polr2aP08775 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Polr2aP08775 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Polr2aP08775 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2aP08775 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2aP08775 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2aP08775 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2aP08775 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2aP08775 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.51■□□□□ 0.87
Polr2aP08775 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Polr2aP08775 Gm18115-201ENSMUST00000221209 621 ntBASIC20.51■□□□□ 0.87
Polr2aP08775 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms