Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Gm27454-201ENSMUST00000185090 204 ntBASIC23.36■■□□□ 1.33
NeflP08551 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
NeflP08551 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC23.36■■□□□ 1.33
NeflP08551 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NeflP08551 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
NeflP08551 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
NeflP08551 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.35■■□□□ 1.33
NeflP08551 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NeflP08551 Gm6139-201ENSMUST00000079261 882 ntBASIC23.35■■□□□ 1.33
NeflP08551 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Fcho2-208ENSMUST00000224992 2964 ntBASIC23.35■■□□□ 1.33
NeflP08551 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NeflP08551 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
NeflP08551 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NeflP08551 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.34■■□□□ 1.33
NeflP08551 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NeflP08551 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
NeflP08551 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.34■■□□□ 1.33
NeflP08551 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NeflP08551 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NeflP08551 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NeflP08551 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NeflP08551 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
NeflP08551 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NeflP08551 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
NeflP08551 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NeflP08551 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NeflP08551 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NeflP08551 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.33■■□□□ 1.33
NeflP08551 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.33■■□□□ 1.33
NeflP08551 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.33■■□□□ 1.33
NeflP08551 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NeflP08551 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NeflP08551 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
NeflP08551 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NeflP08551 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NeflP08551 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NeflP08551 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NeflP08551 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NeflP08551 Gm43017-201ENSMUST00000198296 752 ntBASIC23.31■■□□□ 1.32
NeflP08551 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NeflP08551 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NeflP08551 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NeflP08551 Zcchc6-207ENSMUST00000225576 2499 ntBASIC23.31■■□□□ 1.32
NeflP08551 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NeflP08551 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
NeflP08551 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NeflP08551 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NeflP08551 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NeflP08551 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NeflP08551 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NeflP08551 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
NeflP08551 Gm19439-201ENSMUST00000198195 2273 ntBASIC23.29■■□□□ 1.32
NeflP08551 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.29■■□□□ 1.32
NeflP08551 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
NeflP08551 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NeflP08551 Tgds-204ENSMUST00000228543 1594 ntBASIC23.29■■□□□ 1.32
NeflP08551 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.29■■□□□ 1.32
NeflP08551 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC23.29■■□□□ 1.32
NeflP08551 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms