Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
P06328 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Gm6420-201ENSMUST00000193885 723 ntBASIC13.14□□□□□ -0.31
P06328 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P06328 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.13□□□□□ -0.31
P06328 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.13□□□□□ -0.31
P06328 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.13□□□□□ -0.31
P06328 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
P06328 Nespas-201ENSMUST00000143738 1083 ntBASIC13.13□□□□□ -0.31
P06328 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.13□□□□□ -0.31
P06328 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
P06328 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06328 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.12□□□□□ -0.31
P06328 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Gm10493-201ENSMUST00000097270 612 ntBASIC13.12□□□□□ -0.31
P06328 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.12□□□□□ -0.31
P06328 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.12□□□□□ -0.31
P06328 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.12□□□□□ -0.31
P06328 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P06328 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.12□□□□□ -0.31
P06328 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P06328 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.11□□□□□ -0.31
P06328 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.11□□□□□ -0.31
P06328 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.11□□□□□ -0.31
P06328 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.11□□□□□ -0.31
P06328 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.11□□□□□ -0.31
P06328 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.11□□□□□ -0.31
P06328 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.11□□□□□ -0.31
P06328 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P06328 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P06328 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
P06328 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P06328 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.1□□□□□ -0.31
P06328 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Gm8969-201ENSMUST00000199694 526 ntBASIC13.1□□□□□ -0.31
P06328 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.1□□□□□ -0.31
P06328 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
P06328 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06328 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms