Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm2559-201ENSMUST00000201323 363 ntBASIC14.56□□□□□ -0.08
P04940 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04940 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04940 Gm4968-201ENSMUST00000071458 858 ntBASIC14.56□□□□□ -0.08
P04940 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04940 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04940 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04940 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.55□□□□□ -0.08
P04940 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
P04940 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.55□□□□□ -0.08
P04940 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Dio3-201ENSMUST00000097228 1449 ntBASIC14.55□□□□□ -0.08
P04940 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
P04940 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04940 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.54□□□□□ -0.08
P04940 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.54□□□□□ -0.08
P04940 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
P04940 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.54□□□□□ -0.08
P04940 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04940 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
P04940 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
P04940 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.53□□□□□ -0.08
P04940 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.53□□□□□ -0.08
P04940 Mir2861-201ENSMUST00000175539 82 ntBASIC14.53□□□□□ -0.08
P04940 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.53□□□□□ -0.08
P04940 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.53□□□□□ -0.08
P04940 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04940 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.52□□□□□ -0.08
P04940 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04940 Gm10418-201ENSMUST00000100943 576 ntBASIC14.52□□□□□ -0.09
P04940 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.52□□□□□ -0.09
P04940 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
P04940 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04940 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04940 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
P04940 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04940 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.52□□□□□ -0.09
P04940 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
P04940 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04940 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04940 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.52□□□□□ -0.09
P04940 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.51□□□□□ -0.09
P04940 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04940 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04940 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.51□□□□□ -0.09
P04940 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
P04940 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04940 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.51□□□□□ -0.09
P04940 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
P04940 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04940 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.51□□□□□ -0.09
P04940 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.51□□□□□ -0.09
P04940 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04940 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04940 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms