Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.81■□□□□ 0.28
IghmP01872 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.81■□□□□ 0.28
IghmP01872 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IghmP01872 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
IghmP01872 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Gm7290-201ENSMUST00000104990 617 ntBASIC16.8■□□□□ 0.28
IghmP01872 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Gm12918-201ENSMUST00000120234 636 ntBASIC16.8■□□□□ 0.28
IghmP01872 Gm15710-201ENSMUST00000121821 636 ntBASIC16.8■□□□□ 0.28
IghmP01872 Gm6211-202ENSMUST00000167849 925 ntBASIC16.8■□□□□ 0.28
IghmP01872 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Gm5075-201ENSMUST00000196916 622 ntBASIC16.8■□□□□ 0.28
IghmP01872 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.8■□□□□ 0.28
IghmP01872 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.8■□□□□ 0.28
IghmP01872 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.8■□□□□ 0.28
IghmP01872 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
IghmP01872 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IghmP01872 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IghmP01872 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IghmP01872 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.79■□□□□ 0.28
IghmP01872 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.79■□□□□ 0.28
IghmP01872 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IghmP01872 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IghmP01872 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
IghmP01872 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.79■□□□□ 0.28
IghmP01872 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IghmP01872 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IghmP01872 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IghmP01872 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IghmP01872 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.78■□□□□ 0.28
IghmP01872 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
IghmP01872 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IghmP01872 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IghmP01872 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IghmP01872 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.77■□□□□ 0.28
IghmP01872 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IghmP01872 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IghmP01872 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
IghmP01872 Gm38285-201ENSMUST00000192928 922 ntBASIC16.77■□□□□ 0.28
IghmP01872 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IghmP01872 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IghmP01872 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.77■□□□□ 0.28
IghmP01872 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
IghmP01872 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
IghmP01872 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
IghmP01872 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.77■□□□□ 0.27
IghmP01872 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
IghmP01872 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms