Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TcraP01849 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TcraP01849 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TcraP01849 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TcraP01849 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
TcraP01849 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TcraP01849 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Golgb1-201ENSMUST00000023534 498 ntBASIC13.11□□□□□ -0.31
TcraP01849 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TcraP01849 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TcraP01849 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TcraP01849 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TcraP01849 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TcraP01849 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.1□□□□□ -0.31
TcraP01849 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TcraP01849 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
TcraP01849 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.1□□□□□ -0.31
TcraP01849 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TcraP01849 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TcraP01849 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.09□□□□□ -0.31
TcraP01849 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.09□□□□□ -0.31
TcraP01849 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Gm12922-201ENSMUST00000120626 809 ntBASIC13.09□□□□□ -0.31
TcraP01849 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.09□□□□□ -0.31
TcraP01849 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.09□□□□□ -0.31
TcraP01849 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.09□□□□□ -0.31
TcraP01849 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.09□□□□□ -0.31
TcraP01849 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TcraP01849 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TcraP01849 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.08□□□□□ -0.31
TcraP01849 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.08□□□□□ -0.32
TcraP01849 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TcraP01849 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TcraP01849 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.08□□□□□ -0.32
TcraP01849 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.08□□□□□ -0.32
TcraP01849 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.08□□□□□ -0.32
TcraP01849 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TcraP01849 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TcraP01849 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
TcraP01849 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TcraP01849 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TcraP01849 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.07□□□□□ -0.32
TcraP01849 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TcraP01849 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms