Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.52■□□□□ 0.08
Igh-VJ558P01758 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Igh-VJ558P01758 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igh-VJ558P01758 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Igh-VJ558P01758 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Igh-VJ558P01758 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Igh-VJ558P01758 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igh-VJ558P01758 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.52■□□□□ 0.07
Igh-VJ558P01758 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igh-VJ558P01758 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igh-VJ558P01758 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igh-VJ558P01758 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Igh-VJ558P01758 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.52■□□□□ 0.07
Igh-VJ558P01758 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.51■□□□□ 0.07
Igh-VJ558P01758 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.5■□□□□ 0.07
Igh-VJ558P01758 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Gm11927-201ENSMUST00000118472 759 ntBASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Gm5408-201ENSMUST00000197998 747 ntBASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igh-VJ558P01758 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.48■□□□□ 0.07
Igh-VJ558P01758 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igh-VJ558P01758 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms