Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.69□□□□□ -0.38
Sh2d1aO88890 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 AV356131-201ENSMUST00000206201 750 ntBASIC12.69□□□□□ -0.38
Sh2d1aO88890 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.69□□□□□ -0.38
Sh2d1aO88890 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh2d1aO88890 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.69□□□□□ -0.38
Sh2d1aO88890 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Gm18284-201ENSMUST00000172604 624 ntBASIC12.68□□□□□ -0.38
Sh2d1aO88890 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh2d1aO88890 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Gm26571-201ENSMUST00000181399 666 ntBASIC12.67□□□□□ -0.38
Sh2d1aO88890 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.67□□□□□ -0.38
Sh2d1aO88890 Gm42569-201ENSMUST00000200539 472 ntBASIC12.67□□□□□ -0.38
Sh2d1aO88890 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sh2d1aO88890 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.66□□□□□ -0.38
Sh2d1aO88890 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh2d1aO88890 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms