Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Best1O88870 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Best1O88870 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Best1O88870 Gm29791-202ENSMUST00000207888 369 ntBASIC17.26■□□□□ 0.35
Best1O88870 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Best1O88870 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.26■□□□□ 0.35
Best1O88870 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Best1O88870 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Best1O88870 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.25■□□□□ 0.35
Best1O88870 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Best1O88870 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Best1O88870 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.24■□□□□ 0.35
Best1O88870 Gm10517-202ENSMUST00000192970 758 ntBASIC17.24■□□□□ 0.35
Best1O88870 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.24■□□□□ 0.35
Best1O88870 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.24■□□□□ 0.35
Best1O88870 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Best1O88870 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Best1O88870 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Best1O88870 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Best1O88870 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Best1O88870 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.23■□□□□ 0.35
Best1O88870 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.23■□□□□ 0.35
Best1O88870 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Best1O88870 Gm4974-201ENSMUST00000209974 875 ntBASIC17.23■□□□□ 0.35
Best1O88870 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Best1O88870 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Best1O88870 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Best1O88870 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Best1O88870 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Gm5417-201ENSMUST00000079706 384 ntBASIC17.22■□□□□ 0.35
Best1O88870 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.22■□□□□ 0.35
Best1O88870 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Best1O88870 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Best1O88870 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Best1O88870 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Best1O88870 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Best1O88870 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.21■□□□□ 0.35
Best1O88870 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.21■□□□□ 0.35
Best1O88870 Gm3375-201ENSMUST00000203929 796 ntBASIC17.21■□□□□ 0.35
Best1O88870 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Best1O88870 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Best1O88870 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Best1O88870 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.2■□□□□ 0.34
Best1O88870 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.2■□□□□ 0.34
Best1O88870 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Best1O88870 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms