Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hcn1O88704 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hcn1O88704 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcn1O88704 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Hcn1O88704 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hcn1O88704 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcn1O88704 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.16■□□□□ 0.34
Hcn1O88704 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcn1O88704 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hcn1O88704 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hcn1O88704 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hcn1O88704 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn1O88704 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Hcn1O88704 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Hcn1O88704 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.15■□□□□ 0.34
Hcn1O88704 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.15■□□□□ 0.34
Hcn1O88704 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.15■□□□□ 0.34
Hcn1O88704 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.15■□□□□ 0.34
Hcn1O88704 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.15■□□□□ 0.34
Hcn1O88704 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn1O88704 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.14■□□□□ 0.33
Hcn1O88704 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.14■□□□□ 0.33
Hcn1O88704 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.14■□□□□ 0.33
Hcn1O88704 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.14■□□□□ 0.33
Hcn1O88704 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.14■□□□□ 0.33
Hcn1O88704 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hcn1O88704 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn1O88704 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hcn1O88704 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hcn1O88704 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn1O88704 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hcn1O88704 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.12■□□□□ 0.33
Hcn1O88704 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hcn1O88704 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn1O88704 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.12■□□□□ 0.33
Hcn1O88704 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.12■□□□□ 0.33
Hcn1O88704 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.12■□□□□ 0.33
Hcn1O88704 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms