Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.43■□□□□ 0.38
ClppO88696 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
ClppO88696 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.43■□□□□ 0.38
ClppO88696 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ClppO88696 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClppO88696 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ClppO88696 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ClppO88696 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Gm2399-201ENSMUST00000104944 225 ntBASIC17.42■□□□□ 0.38
ClppO88696 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ClppO88696 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Gm13158-201ENSMUST00000122007 736 ntBASIC17.42■□□□□ 0.38
ClppO88696 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.42■□□□□ 0.38
ClppO88696 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.42■□□□□ 0.38
ClppO88696 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.42■□□□□ 0.38
ClppO88696 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ClppO88696 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.42■□□□□ 0.38
ClppO88696 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ClppO88696 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.42■□□□□ 0.38
ClppO88696 Flg-201ENSMUST00000050758 1488 ntBASIC17.42■□□□□ 0.38
ClppO88696 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClppO88696 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.41■□□□□ 0.38
ClppO88696 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ClppO88696 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Gm15378-201ENSMUST00000121894 207 ntBASIC17.41■□□□□ 0.38
ClppO88696 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.41■□□□□ 0.38
ClppO88696 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ClppO88696 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ClppO88696 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClppO88696 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.4■□□□□ 0.38
ClppO88696 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.4■□□□□ 0.38
ClppO88696 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ClppO88696 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
ClppO88696 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.4■□□□□ 0.38
ClppO88696 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.4■□□□□ 0.38
ClppO88696 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.4■□□□□ 0.38
ClppO88696 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClppO88696 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ClppO88696 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ClppO88696 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ClppO88696 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.39■□□□□ 0.37
ClppO88696 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.39■□□□□ 0.37
ClppO88696 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.39■□□□□ 0.37
ClppO88696 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ClppO88696 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.39■□□□□ 0.37
ClppO88696 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.39■□□□□ 0.37
ClppO88696 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClppO88696 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.38■□□□□ 0.37
ClppO88696 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms