Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.23■□□□□ 0.19
Lmx1bO88609 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmx1bO88609 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.23■□□□□ 0.19
Lmx1bO88609 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmx1bO88609 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lmx1bO88609 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lmx1bO88609 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmx1bO88609 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.22■□□□□ 0.19
Lmx1bO88609 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lmx1bO88609 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Lmx1bO88609 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.22■□□□□ 0.19
Lmx1bO88609 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.22■□□□□ 0.19
Lmx1bO88609 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lmx1bO88609 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lmx1bO88609 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmx1bO88609 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Lmx1bO88609 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.21■□□□□ 0.19
Lmx1bO88609 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Zfp783-201ENSMUST00000095946 670 ntBASIC16.21■□□□□ 0.19
Lmx1bO88609 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.21■□□□□ 0.19
Lmx1bO88609 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lmx1bO88609 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lmx1bO88609 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Lmx1bO88609 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.21■□□□□ 0.18
Lmx1bO88609 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lmx1bO88609 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.2■□□□□ 0.18
Lmx1bO88609 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.2■□□□□ 0.18
Lmx1bO88609 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.2■□□□□ 0.18
Lmx1bO88609 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.2■□□□□ 0.18
Lmx1bO88609 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.2■□□□□ 0.18
Lmx1bO88609 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.2■□□□□ 0.18
Lmx1bO88609 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lmx1bO88609 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lmx1bO88609 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.2■□□□□ 0.18
Lmx1bO88609 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmx1bO88609 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lmx1bO88609 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.19■□□□□ 0.18
Lmx1bO88609 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.19■□□□□ 0.18
Lmx1bO88609 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Lmx1bO88609 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Gm715-201ENSMUST00000117865 831 ntBASIC16.19■□□□□ 0.18
Lmx1bO88609 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.19■□□□□ 0.18
Lmx1bO88609 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lmx1bO88609 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmx1bO88609 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.18■□□□□ 0.18
Lmx1bO88609 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.18■□□□□ 0.18
Lmx1bO88609 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.18■□□□□ 0.18
Lmx1bO88609 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lmx1bO88609 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms