Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.53■□□□□ 0.88
Becn1O88597 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Becn1O88597 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Becn1O88597 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.53■□□□□ 0.88
Becn1O88597 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Becn1O88597 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.53■□□□□ 0.88
Becn1O88597 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Becn1O88597 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Becn1O88597 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Becn1O88597 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Becn1O88597 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Becn1O88597 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Becn1O88597 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.52■□□□□ 0.88
Becn1O88597 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Becn1O88597 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Becn1O88597 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Becn1O88597 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Becn1O88597 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Becn1O88597 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.51■□□□□ 0.87
Becn1O88597 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Becn1O88597 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Becn1O88597 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Becn1O88597 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.5■□□□□ 0.87
Becn1O88597 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Becn1O88597 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Becn1O88597 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.49■□□□□ 0.87
Becn1O88597 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Becn1O88597 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Becn1O88597 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Becn1O88597 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Becn1O88597 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Becn1O88597 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Becn1O88597 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.48■□□□□ 0.87
Becn1O88597 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.48■□□□□ 0.87
Becn1O88597 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.48■□□□□ 0.87
Becn1O88597 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.48■□□□□ 0.87
Becn1O88597 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Becn1O88597 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Becn1O88597 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.47■□□□□ 0.87
Becn1O88597 Gm43173-201ENSMUST00000202246 593 ntBASIC20.47■□□□□ 0.87
Becn1O88597 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.47■□□□□ 0.87
Becn1O88597 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.47■□□□□ 0.87
Becn1O88597 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.47■□□□□ 0.87
Becn1O88597 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Becn1O88597 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Becn1O88597 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.46■□□□□ 0.87
Becn1O88597 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Becn1O88597 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Becn1O88597 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Becn1O88597 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.46■□□□□ 0.87
Becn1O88597 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Becn1O88597 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Becn1O88597 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms