Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cops4O88544 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cops4O88544 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Gm40848-201ENSMUST00000221998 324 ntBASIC16.57■□□□□ 0.24
Cops4O88544 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cops4O88544 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops4O88544 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.56■□□□□ 0.24
Cops4O88544 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cops4O88544 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.56■□□□□ 0.24
Cops4O88544 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.56■□□□□ 0.24
Cops4O88544 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cops4O88544 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cops4O88544 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops4O88544 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.55■□□□□ 0.24
Cops4O88544 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Cops4O88544 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cops4O88544 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cops4O88544 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops4O88544 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops4O88544 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cops4O88544 Gm43017-201ENSMUST00000198296 752 ntBASIC16.55■□□□□ 0.24
Cops4O88544 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cops4O88544 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cops4O88544 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops4O88544 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops4O88544 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.54■□□□□ 0.24
Cops4O88544 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cops4O88544 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cops4O88544 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cops4O88544 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops4O88544 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cops4O88544 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cops4O88544 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cops4O88544 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Cops4O88544 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.53■□□□□ 0.24
Cops4O88544 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.53■□□□□ 0.24
Cops4O88544 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops4O88544 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cops4O88544 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops4O88544 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops4O88544 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cops4O88544 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.52■□□□□ 0.24
Cops4O88544 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.52■□□□□ 0.24
Cops4O88544 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cops4O88544 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms