Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gm7290-201ENSMUST00000104990 617 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gm12527-201ENSMUST00000117967 564 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gm12918-201ENSMUST00000120234 636 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gm15710-201ENSMUST00000121821 636 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gm5075-201ENSMUST00000196916 622 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Gm6365-201ENSMUST00000054711 744 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.3■□□□□ 0.36
Dnmt3bO88509 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3bO88509 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.29■□□□□ 0.36
Dnmt3bO88509 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Dnmt3bO88509 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Gm13168-201ENSMUST00000121771 632 ntBASIC17.28■□□□□ 0.36
Dnmt3bO88509 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Gm22325-201ENSMUST00000158904 308 ntBASIC17.28■□□□□ 0.36
Dnmt3bO88509 Mir7071-201ENSMUST00000184847 69 ntBASIC17.28■□□□□ 0.36
Dnmt3bO88509 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.28■□□□□ 0.36
Dnmt3bO88509 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.28■□□□□ 0.36
Dnmt3bO88509 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dnmt3bO88509 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dnmt3bO88509 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.27■□□□□ 0.36
Dnmt3bO88509 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.27■□□□□ 0.36
Dnmt3bO88509 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dnmt3bO88509 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Dnmt3bO88509 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Dnmt3bO88509 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Dnmt3bO88509 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Dnmt3bO88509 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Dnmt3bO88509 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dnmt3bO88509 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dnmt3bO88509 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dnmt3bO88509 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dnmt3bO88509 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dnmt3bO88509 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Dnmt3bO88509 Gm13146-201ENSMUST00000118508 780 ntBASIC17.25■□□□□ 0.35
Dnmt3bO88509 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms