Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnfrsf17O88472 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Mir1668-201ENSMUST00000184114 107 ntBASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Gm28659-201ENSMUST00000188013 759 ntBASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf17O88472 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.64■□□□□ 0.26
Tnfrsf17O88472 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Tnfrsf17O88472 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf17O88472 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf17O88472 Gm34391-201ENSMUST00000203706 907 ntBASIC16.64■□□□□ 0.25
Tnfrsf17O88472 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.64■□□□□ 0.25
Tnfrsf17O88472 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf17O88472 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf17O88472 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf17O88472 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Mir2861-201ENSMUST00000175539 82 ntBASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf17O88472 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Gm11950-201ENSMUST00000121615 838 ntBASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Gm7370-201ENSMUST00000219471 767 ntBASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf17O88472 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Iqck-206ENSMUST00000208658 2891 ntBASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf17O88472 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms