Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.56■□□□□ 0.24
Capns1O88456 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Capns1O88456 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Capns1O88456 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.56■□□□□ 0.24
Capns1O88456 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.56■□□□□ 0.24
Capns1O88456 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.56■□□□□ 0.24
Capns1O88456 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Capns1O88456 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.56■□□□□ 0.24
Capns1O88456 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Capns1O88456 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Capns1O88456 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Capns1O88456 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Capns1O88456 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Capns1O88456 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.55■□□□□ 0.24
Capns1O88456 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.55■□□□□ 0.24
Capns1O88456 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.55■□□□□ 0.24
Capns1O88456 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.55■□□□□ 0.24
Capns1O88456 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Capns1O88456 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Capns1O88456 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Capns1O88456 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
Capns1O88456 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.54■□□□□ 0.24
Capns1O88456 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.54■□□□□ 0.24
Capns1O88456 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.54■□□□□ 0.24
Capns1O88456 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.54■□□□□ 0.24
Capns1O88456 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Capns1O88456 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Capns1O88456 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Capns1O88456 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.54■□□□□ 0.24
Capns1O88456 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Capns1O88456 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.54■□□□□ 0.24
Capns1O88456 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.53■□□□□ 0.24
Capns1O88456 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.53■□□□□ 0.24
Capns1O88456 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.53■□□□□ 0.24
Capns1O88456 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.53■□□□□ 0.24
Capns1O88456 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Capns1O88456 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.53■□□□□ 0.24
Capns1O88456 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Capns1O88456 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.52■□□□□ 0.24
Capns1O88456 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.52■□□□□ 0.24
Capns1O88456 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Capns1O88456 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Capns1O88456 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Capns1O88456 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Capns1O88456 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Capns1O88456 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms