Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.05■□□□□ 0.32
Tgfbr3O88393 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Gm10013-201ENSMUST00000106074 672 ntBASIC17.05■□□□□ 0.32
Tgfbr3O88393 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Gm38027-201ENSMUST00000192315 235 ntBASIC17.05■□□□□ 0.32
Tgfbr3O88393 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.05■□□□□ 0.32
Tgfbr3O88393 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.05■□□□□ 0.32
Tgfbr3O88393 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tgfbr3O88393 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.05■□□□□ 0.32
Tgfbr3O88393 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tgfbr3O88393 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Tgfbr3O88393 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tgfbr3O88393 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.03■□□□□ 0.32
Tgfbr3O88393 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tgfbr3O88393 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tgfbr3O88393 AA414768-201ENSMUST00000121924 1257 ntBASIC17.02■□□□□ 0.32
Tgfbr3O88393 Mir5130-201ENSMUST00000175160 84 ntBASIC17.02■□□□□ 0.32
Tgfbr3O88393 Gm6345-202ENSMUST00000180900 204 ntBASIC17.02■□□□□ 0.32
Tgfbr3O88393 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.02■□□□□ 0.32
Tgfbr3O88393 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tgfbr3O88393 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tgfbr3O88393 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tgfbr3O88393 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tgfbr3O88393 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tgfbr3O88393 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tgfbr3O88393 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.01■□□□□ 0.31
Tgfbr3O88393 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Gm2274-201ENSMUST00000184539 609 ntBASIC17.01■□□□□ 0.31
Tgfbr3O88393 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tgfbr3O88393 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Tgfbr3O88393 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17■□□□□ 0.31
Tgfbr3O88393 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17■□□□□ 0.31
Tgfbr3O88393 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tgfbr3O88393 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17■□□□□ 0.31
Tgfbr3O88393 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms