Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm10139O88245 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Idnk-204ENSMUST00000226010 1898 ntBASIC10.94□□□□□ -0.66
Gm10139O88245 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm10139O88245 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
Gm10139O88245 Gm10033-202ENSMUST00000211874 928 ntBASIC10.94□□□□□ -0.66
Gm10139O88245 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm10139O88245 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Gm10139O88245 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm10139O88245 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm10139O88245 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm10139O88245 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC10.93□□□□□ -0.66
Gm10139O88245 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.93□□□□□ -0.66
Gm10139O88245 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Gm10139O88245 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Gm37563-201ENSMUST00000192580 1513 ntBASIC10.93□□□□□ -0.66
Gm10139O88245 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Gm44544-201ENSMUST00000207052 1844 ntBASIC10.93□□□□□ -0.66
Gm10139O88245 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm10139O88245 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm10139O88245 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC10.92□□□□□ -0.66
Gm10139O88245 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm10139O88245 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm10139O88245 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm10139O88245 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm10139O88245 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm10139O88245 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm10139O88245 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC10.92□□□□□ -0.66
Gm10139O88245 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC10.92□□□□□ -0.66
Gm10139O88245 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm10139O88245 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm10139O88245 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm10139O88245 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm10139O88245 AC122335.2-201ENSMUST00000213901 6181 ntBASIC10.91□□□□□ -0.66
Gm10139O88245 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm10139O88245 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm10139O88245 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm10139O88245 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.91□□□□□ -0.66
Gm10139O88245 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm10139O88245 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms