Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 Mir2861-201ENSMUST00000175539 82 ntBASIC17.69■□□□□ 0.42
Pdlim1O70400 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.69■□□□□ 0.42
Pdlim1O70400 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.69■□□□□ 0.42
Pdlim1O70400 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.69■□□□□ 0.42
Pdlim1O70400 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim1O70400 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.69■□□□□ 0.42
Pdlim1O70400 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
Pdlim1O70400 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Gm10418-201ENSMUST00000100943 576 ntBASIC17.68■□□□□ 0.42
Pdlim1O70400 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.68■□□□□ 0.42
Pdlim1O70400 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim1O70400 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim1O70400 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pdlim1O70400 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pdlim1O70400 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.67■□□□□ 0.42
Pdlim1O70400 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.67■□□□□ 0.42
Pdlim1O70400 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim1O70400 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pdlim1O70400 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pdlim1O70400 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.66■□□□□ 0.42
Pdlim1O70400 Gm13168-201ENSMUST00000121771 632 ntBASIC17.66■□□□□ 0.42
Pdlim1O70400 Gm27011-201ENSMUST00000182352 972 ntBASIC17.66■□□□□ 0.42
Pdlim1O70400 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.66■□□□□ 0.42
Pdlim1O70400 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.66■□□□□ 0.42
Pdlim1O70400 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.66■□□□□ 0.42
Pdlim1O70400 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim1O70400 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim1O70400 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.65■□□□□ 0.42
Pdlim1O70400 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim1O70400 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim1O70400 Fst-202ENSMUST00000223640 2612 ntBASIC17.65■□□□□ 0.42
Pdlim1O70400 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim1O70400 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim1O70400 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim1O70400 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pdlim1O70400 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.64■□□□□ 0.41
Pdlim1O70400 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.64■□□□□ 0.41
Pdlim1O70400 Rarb-207ENSMUST00000225921 2756 ntBASIC17.64■□□□□ 0.41
Pdlim1O70400 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim1O70400 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.64■□□□□ 0.41
Pdlim1O70400 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.63■□□□□ 0.41
Pdlim1O70400 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim1O70400 Gm11643-201ENSMUST00000119578 864 ntBASIC17.63■□□□□ 0.41
Pdlim1O70400 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms