Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ldb2O55203 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ldb2O55203 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Ldb2O55203 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb2O55203 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.84■□□□□ 0.45
Ldb2O55203 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb2O55203 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb2O55203 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb2O55203 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ldb2O55203 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ldb2O55203 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb2O55203 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb2O55203 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Ldb2O55203 Gm12441-201ENSMUST00000121806 588 ntBASIC17.84■□□□□ 0.45
Ldb2O55203 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.84■□□□□ 0.45
Ldb2O55203 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb2O55203 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Ldb2O55203 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.84■□□□□ 0.45
Ldb2O55203 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ldb2O55203 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ldb2O55203 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ldb2O55203 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ldb2O55203 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.83■□□□□ 0.44
Ldb2O55203 Gm12896-201ENSMUST00000118430 226 ntBASIC17.83■□□□□ 0.44
Ldb2O55203 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ldb2O55203 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.83■□□□□ 0.44
Ldb2O55203 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb2O55203 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ldb2O55203 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ldb2O55203 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ldb2O55203 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.82■□□□□ 0.44
Ldb2O55203 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.82■□□□□ 0.44
Ldb2O55203 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.82■□□□□ 0.44
Ldb2O55203 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ldb2O55203 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb2O55203 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ldb2O55203 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.81■□□□□ 0.44
Ldb2O55203 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ldb2O55203 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.81■□□□□ 0.44
Ldb2O55203 Gm27011-201ENSMUST00000182352 972 ntBASIC17.81■□□□□ 0.44
Ldb2O55203 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Mtag2-201ENSMUST00000058665 714 ntBASIC17.81■□□□□ 0.44
Ldb2O55203 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ldb2O55203 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb2O55203 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Ldb2O55203 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ldb2O55203 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.8■□□□□ 0.44
Ldb2O55203 Gm20049-201ENSMUST00000219950 730 ntBASIC17.8■□□□□ 0.44
Ldb2O55203 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ldb2O55203 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.8■□□□□ 0.44
Ldb2O55203 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.8■□□□□ 0.44
Ldb2O55203 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb2O55203 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Gm11249-201ENSMUST00000117071 859 ntBASIC17.79■□□□□ 0.44
Ldb2O55203 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.79■□□□□ 0.44
Ldb2O55203 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.79■□□□□ 0.44
Ldb2O55203 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms