Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.19□□□□□ -0.14
Pde6dO55057 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pde6dO55057 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.19□□□□□ -0.14
Pde6dO55057 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6dO55057 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pde6dO55057 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6dO55057 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Tgds-204ENSMUST00000228543 1594 ntBASIC14.18□□□□□ -0.14
Pde6dO55057 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pde6dO55057 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.18□□□□□ -0.14
Pde6dO55057 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.18□□□□□ -0.14
Pde6dO55057 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6dO55057 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pde6dO55057 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pde6dO55057 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pde6dO55057 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.17□□□□□ -0.14
Pde6dO55057 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.17□□□□□ -0.14
Pde6dO55057 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Pde6dO55057 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pde6dO55057 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pde6dO55057 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Pde6dO55057 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6dO55057 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pde6dO55057 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Pde6dO55057 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Gm7860-201ENSMUST00000121190 879 ntBASIC14.16□□□□□ -0.14
Pde6dO55057 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6dO55057 Haglr-201ENSMUST00000100000 2085 ntBASIC14.16□□□□□ -0.14
Pde6dO55057 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Pde6dO55057 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Pde6dO55057 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pde6dO55057 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6dO55057 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.15□□□□□ -0.14
Pde6dO55057 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pde6dO55057 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.15□□□□□ -0.14
Pde6dO55057 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6dO55057 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms