Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.19■□□□□ 0.02
Cxcl13O55038 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.19■□□□□ 0.02
Cxcl13O55038 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.19■□□□□ 0.02
Cxcl13O55038 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.18■□□□□ 0.02
Cxcl13O55038 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cxcl13O55038 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cxcl13O55038 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Cxcl13O55038 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Gm13836-201ENSMUST00000121159 501 ntBASIC15.18■□□□□ 0.02
Cxcl13O55038 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.18■□□□□ 0.02
Cxcl13O55038 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.18■□□□□ 0.02
Cxcl13O55038 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cxcl13O55038 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.18■□□□□ 0.02
Cxcl13O55038 Gm21814-202ENSMUST00000203277 873 ntBASIC15.18■□□□□ 0.02
Cxcl13O55038 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.18■□□□□ 0.02
Cxcl13O55038 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cxcl13O55038 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.18■□□□□ 0.02
Cxcl13O55038 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl13O55038 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Tgds-204ENSMUST00000228543 1594 ntBASIC15.17■□□□□ 0.02
Cxcl13O55038 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Timm23-208ENSMUST00000226683 750 ntBASIC15.17■□□□□ 0.02
Cxcl13O55038 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cxcl13O55038 Golph3-205ENSMUST00000228671 2842 ntBASIC15.17■□□□□ 0.02
Cxcl13O55038 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl13O55038 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.16■□□□□ 0.02
Cxcl13O55038 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Gm11643-201ENSMUST00000119578 864 ntBASIC15.16■□□□□ 0.02
Cxcl13O55038 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Odf3b-204ENSMUST00000227834 930 ntBASIC15.16■□□□□ 0.02
Cxcl13O55038 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl13O55038 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.16■□□□□ 0.02
Cxcl13O55038 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.16■□□□□ 0.02
Cxcl13O55038 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cxcl13O55038 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl13O55038 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl13O55038 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl13O55038 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cxcl13O55038 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl13O55038 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cxcl13O55038 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.15■□□□□ 0.02
Cxcl13O55038 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl13O55038 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl13O55038 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms