Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.85■□□□□ 0.77
Prom1O54990 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Prom1O54990 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Prom1O54990 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Prom1O54990 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.84■□□□□ 0.77
Prom1O54990 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.84■□□□□ 0.77
Prom1O54990 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prom1O54990 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Prom1O54990 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.84■□□□□ 0.77
Prom1O54990 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prom1O54990 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prom1O54990 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prom1O54990 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.83■□□□□ 0.77
Prom1O54990 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Prom1O54990 Gm18959-201ENSMUST00000208954 655 ntBASIC19.83■□□□□ 0.77
Prom1O54990 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prom1O54990 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.83■□□□□ 0.77
Prom1O54990 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prom1O54990 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prom1O54990 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prom1O54990 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.82■□□□□ 0.76
Prom1O54990 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Gm7367-201ENSMUST00000057611 492 ntBASIC19.82■□□□□ 0.76
Prom1O54990 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.82■□□□□ 0.76
Prom1O54990 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prom1O54990 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Prom1O54990 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.81■□□□□ 0.76
Prom1O54990 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prom1O54990 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prom1O54990 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prom1O54990 Gm38027-201ENSMUST00000192315 235 ntBASIC19.8■□□□□ 0.76
Prom1O54990 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Prom1O54990 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prom1O54990 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prom1O54990 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prom1O54990 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prom1O54990 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.79■□□□□ 0.76
Prom1O54990 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Prom1O54990 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prom1O54990 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prom1O54990 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.78■□□□□ 0.76
Prom1O54990 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prom1O54990 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Gm23634-201ENSMUST00000175071 91 ntBASIC19.78■□□□□ 0.76
Prom1O54990 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.78■□□□□ 0.76
Prom1O54990 Gm18032-201ENSMUST00000222541 538 ntBASIC19.78■□□□□ 0.76
Prom1O54990 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prom1O54990 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prom1O54990 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prom1O54990 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prom1O54990 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prom1O54990 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.77■□□□□ 0.76
Prom1O54990 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prom1O54990 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms