Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf13O54965 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Rnf13O54965 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf13O54965 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rnf13O54965 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.28■□□□□ 0.2
Rnf13O54965 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf13O54965 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf13O54965 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf13O54965 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf13O54965 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf13O54965 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.27■□□□□ 0.2
Rnf13O54965 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.27■□□□□ 0.2
Rnf13O54965 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rnf13O54965 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rnf13O54965 Gm9988-201ENSMUST00000069786 435 ntBASIC16.27■□□□□ 0.2
Rnf13O54965 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf13O54965 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rnf13O54965 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf13O54965 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rnf13O54965 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf13O54965 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Rnf13O54965 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf13O54965 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rnf13O54965 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf13O54965 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf13O54965 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf13O54965 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.26■□□□□ 0.19
Rnf13O54965 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Rnf13O54965 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf13O54965 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf13O54965 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf13O54965 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.25■□□□□ 0.19
Rnf13O54965 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Rnf13O54965 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf13O54965 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rnf13O54965 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf13O54965 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf13O54965 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf13O54965 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf13O54965 Gm8969-201ENSMUST00000199694 526 ntBASIC16.24■□□□□ 0.19
Rnf13O54965 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.24■□□□□ 0.19
Rnf13O54965 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf13O54965 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf13O54965 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.23■□□□□ 0.19
Rnf13O54965 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 Gm13146-201ENSMUST00000118508 780 ntBASIC16.23■□□□□ 0.19
Rnf13O54965 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf13O54965 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Rnf13O54965 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.23■□□□□ 0.19
Rnf13O54965 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf13O54965 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms