Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Per2O54943 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Per2O54943 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per2O54943 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Per2O54943 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per2O54943 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Per2O54943 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Per2O54943 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Per2O54943 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.71■□□□□ 0.59
Per2O54943 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per2O54943 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.71■□□□□ 0.59
Per2O54943 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.71■□□□□ 0.59
Per2O54943 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Per2O54943 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per2O54943 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.71■□□□□ 0.59
Per2O54943 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Per2O54943 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Per2O54943 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.7■□□□□ 0.58
Per2O54943 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.7■□□□□ 0.58
Per2O54943 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Per2O54943 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.7■□□□□ 0.58
Per2O54943 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Mir5133-201ENSMUST00000174955 77 ntBASIC18.7■□□□□ 0.58
Per2O54943 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.7■□□□□ 0.58
Per2O54943 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.7■□□□□ 0.58
Per2O54943 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.7■□□□□ 0.58
Per2O54943 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per2O54943 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.69■□□□□ 0.58
Per2O54943 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Per2O54943 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Per2O54943 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.69■□□□□ 0.58
Per2O54943 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Per2O54943 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Per2O54943 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per2O54943 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.68■□□□□ 0.58
Per2O54943 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.68■□□□□ 0.58
Per2O54943 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Per2O54943 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Per2O54943 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Per2O54943 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per2O54943 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.67■□□□□ 0.58
Per2O54943 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.67■□□□□ 0.58
Per2O54943 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.67■□□□□ 0.58
Per2O54943 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.67■□□□□ 0.58
Per2O54943 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.67■□□□□ 0.58
Per2O54943 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Per2O54943 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.66■□□□□ 0.58
Per2O54943 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Per2O54943 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Per2O54943 Gm13148-201ENSMUST00000118892 745 ntBASIC18.66■□□□□ 0.58
Per2O54943 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.66■□□□□ 0.58
Per2O54943 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.66■□□□□ 0.58
Per2O54943 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Per2O54943 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Per2O54943 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms