Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a6O35544 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc1a6O35544 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a6O35544 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc1a6O35544 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Slc1a6O35544 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Slc1a6O35544 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc1a6O35544 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc1a6O35544 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Slc1a6O35544 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc1a6O35544 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc1a6O35544 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc1a6O35544 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.7■□□□□ 0.42
Slc1a6O35544 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Slc1a6O35544 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Slc1a6O35544 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc1a6O35544 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Slc1a6O35544 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc1a6O35544 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc1a6O35544 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.69■□□□□ 0.42
Slc1a6O35544 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Slc1a6O35544 Gm43060-201ENSMUST00000200621 289 ntBASIC17.69■□□□□ 0.42
Slc1a6O35544 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc1a6O35544 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc1a6O35544 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc1a6O35544 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Slc1a6O35544 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc1a6O35544 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc1a6O35544 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a6O35544 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a6O35544 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.67■□□□□ 0.42
Slc1a6O35544 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a6O35544 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a6O35544 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc1a6O35544 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a6O35544 Gm43017-201ENSMUST00000198296 752 ntBASIC17.67■□□□□ 0.42
Slc1a6O35544 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a6O35544 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.67■□□□□ 0.42
Slc1a6O35544 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc1a6O35544 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Slc1a6O35544 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.67■□□□□ 0.42
Slc1a6O35544 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.67■□□□□ 0.42
Slc1a6O35544 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc1a6O35544 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc1a6O35544 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc1a6O35544 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc1a6O35544 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc1a6O35544 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc1a6O35544 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc1a6O35544 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc1a6O35544 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc1a6O35544 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc1a6O35544 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc1a6O35544 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Idnk-204ENSMUST00000226010 1898 ntBASIC17.65■□□□□ 0.42
Slc1a6O35544 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.65■□□□□ 0.42
Slc1a6O35544 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.65■□□□□ 0.42
Slc1a6O35544 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms