Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Stx1aO35526 Reep4-203ENSMUST00000226563 1444 ntBASIC20.2■□□□□ 0.82
Stx1aO35526 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.2■□□□□ 0.82
Stx1aO35526 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.2■□□□□ 0.82
Stx1aO35526 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Stx1aO35526 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Stx1aO35526 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Stx1aO35526 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Gm9988-201ENSMUST00000069786 435 ntBASIC20.19■□□□□ 0.82
Stx1aO35526 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Stx1aO35526 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stx1aO35526 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.18■□□□□ 0.82
Stx1aO35526 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.18■□□□□ 0.82
Stx1aO35526 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.18■□□□□ 0.82
Stx1aO35526 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Stx1aO35526 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Stx1aO35526 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stx1aO35526 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Stx1aO35526 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.17■□□□□ 0.82
Stx1aO35526 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.17■□□□□ 0.82
Stx1aO35526 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.17■□□□□ 0.82
Stx1aO35526 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stx1aO35526 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Stx1aO35526 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.16■□□□□ 0.82
Stx1aO35526 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.16■□□□□ 0.82
Stx1aO35526 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.16■□□□□ 0.82
Stx1aO35526 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.16■□□□□ 0.82
Stx1aO35526 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Stx1aO35526 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Stx1aO35526 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stx1aO35526 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.15■□□□□ 0.82
Stx1aO35526 Gm22325-201ENSMUST00000158904 308 ntBASIC20.15■□□□□ 0.82
Stx1aO35526 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Stx1aO35526 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Stx1aO35526 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stx1aO35526 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.15■□□□□ 0.82
Stx1aO35526 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.82
Stx1aO35526 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stx1aO35526 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Stx1aO35526 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.14■□□□□ 0.81
Stx1aO35526 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stx1aO35526 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.14■□□□□ 0.81
Stx1aO35526 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stx1aO35526 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms