Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Efnb3O35393 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Efnb3O35393 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.19□□□□□ -0.14
Efnb3O35393 Gm26833-201ENSMUST00000180899 440 ntBASIC14.19□□□□□ -0.14
Efnb3O35393 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Efnb3O35393 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.19□□□□□ -0.14
Efnb3O35393 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Efnb3O35393 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Efnb3O35393 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Efnb3O35393 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Efnb3O35393 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Efnb3O35393 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.17□□□□□ -0.14
Efnb3O35393 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Efnb3O35393 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Efnb3O35393 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Efnb3O35393 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Efnb3O35393 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Efnb3O35393 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Efnb3O35393 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Efnb3O35393 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Efnb3O35393 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Efnb3O35393 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.16□□□□□ -0.14
Efnb3O35393 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Efnb3O35393 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.16□□□□□ -0.14
Efnb3O35393 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Efnb3O35393 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.16□□□□□ -0.14
Efnb3O35393 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.16□□□□□ -0.14
Efnb3O35393 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.16□□□□□ -0.14
Efnb3O35393 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Efnb3O35393 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.16□□□□□ -0.14
Efnb3O35393 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.16□□□□□ -0.14
Efnb3O35393 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.16□□□□□ -0.14
Efnb3O35393 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Efnb3O35393 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.15□□□□□ -0.14
Efnb3O35393 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Efnb3O35393 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms