Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3aO08759 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3aO08759 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3aO08759 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ube3aO08759 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3aO08759 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3aO08759 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3aO08759 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.4■□□□□ 0.7
Ube3aO08759 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ube3aO08759 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.4■□□□□ 0.7
Ube3aO08759 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ube3aO08759 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ube3aO08759 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.4■□□□□ 0.7
Ube3aO08759 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3aO08759 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube3aO08759 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube3aO08759 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ube3aO08759 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.39■□□□□ 0.69
Ube3aO08759 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.39■□□□□ 0.69
Ube3aO08759 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3aO08759 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Ube3aO08759 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.38■□□□□ 0.69
Ube3aO08759 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ube3aO08759 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ube3aO08759 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3aO08759 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ube3aO08759 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ube3aO08759 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.37■□□□□ 0.69
Ube3aO08759 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.37■□□□□ 0.69
Ube3aO08759 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3aO08759 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3aO08759 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.37■□□□□ 0.69
Ube3aO08759 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.37■□□□□ 0.69
Ube3aO08759 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3aO08759 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3aO08759 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ube3aO08759 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3aO08759 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3aO08759 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3aO08759 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ube3aO08759 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.36■□□□□ 0.69
Ube3aO08759 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.36■□□□□ 0.69
Ube3aO08759 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ube3aO08759 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ube3aO08759 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ube3aO08759 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms