Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 AV356131-201ENSMUST00000206201 750 ntBASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm21788J3QNH3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Gm21788J3QNH3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm21788J3QNH3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm21788J3QNH3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Gm8969-201ENSMUST00000199694 526 ntBASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.14■□□□□ 0.01
Gm21788J3QNH3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.13■□□□□ 0.01
Gm21788J3QNH3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms