Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Gm43060-201ENSMUST00000200621 289 ntBASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh1F7BJK1 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh1F7BJK1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh1F7BJK1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh1F7BJK1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh1F7BJK1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms