Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc188F6WEU2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Gm37722-201ENSMUST00000193757 208 ntBASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc188F6WEU2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
Ccdc188F6WEU2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc188F6WEU2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc188F6WEU2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Gm15794-201ENSMUST00000120182 631 ntBASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc188F6WEU2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc188F6WEU2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Auts2-212ENSMUST00000178555 309 ntBASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc188F6WEU2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc188F6WEU2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms