Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.13■□□□□ 0.97
Pcdhb9E9Q5G2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb9E9Q5G2 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb9E9Q5G2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb9E9Q5G2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Gm11643-201ENSMUST00000119578 864 ntBASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhb9E9Q5G2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Gm6576-201ENSMUST00000169678 883 ntBASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Pcdhb9E9Q5G2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb9E9Q5G2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb9E9Q5G2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb9E9Q5G2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb9E9Q5G2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms