Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cntnap3E9PY62 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap3E9PY62 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap3E9PY62 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap3E9PY62 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap3E9PY62 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap3E9PY62 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap3E9PY62 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cntnap3E9PY62 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cntnap3E9PY62 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Gm18733-201ENSMUST00000173950 856 ntBASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Gm18206-201ENSMUST00000207027 926 ntBASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.76■□□□□ 0.75
Cntnap3E9PY62 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Golph3-202ENSMUST00000226517 2359 ntBASIC19.75■□□□□ 0.75
Cntnap3E9PY62 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Gm13474-201ENSMUST00000122466 815 ntBASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Gm27742-201ENSMUST00000184667 60 ntBASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap3E9PY62 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Gm11950-201ENSMUST00000121615 838 ntBASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cntnap3E9PY62 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntnap3E9PY62 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntnap3E9PY62 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.7■□□□□ 0.74
Cntnap3E9PY62 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cntnap3E9PY62 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cntnap3E9PY62 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cntnap3E9PY62 Gm7370-201ENSMUST00000219471 767 ntBASIC19.7■□□□□ 0.74
Cntnap3E9PY62 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cntnap3E9PY62 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cntnap3E9PY62 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms