Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.18■□□□□ 0.02
Mmp27D3YV89 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Gm9988-201ENSMUST00000069786 435 ntBASIC15.18■□□□□ 0.02
Mmp27D3YV89 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Mmp27D3YV89 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.18■□□□□ 0.02
Mmp27D3YV89 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.17■□□□□ 0.02
Mmp27D3YV89 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Gm42642-201ENSMUST00000200683 355 ntBASIC15.17■□□□□ 0.02
Mmp27D3YV89 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.17■□□□□ 0.02
Mmp27D3YV89 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp27D3YV89 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.16■□□□□ 0.02
Mmp27D3YV89 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.16■□□□□ 0.02
Mmp27D3YV89 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp27D3YV89 Dancr-204ENSMUST00000132389 2347 ntBASIC15.15■□□□□ 0.02
Mmp27D3YV89 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp27D3YV89 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp27D3YV89 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.13■□□□□ 0.01
Mmp27D3YV89 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp27D3YV89 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms